
安装 Elasticsearch
升级系统后安装 Oracle Java 7,既然 Elasticsearch 官方推荐使用 Oracle JDK 7 就不要尝试 JDK 8 和 OpenJDK 了:
$ sudo apt-get update $ sudo apt-get upgrade $ sudo apt-get install software-properties-common $ sudo add-apt-repository ppa:webupd8team/java $ sudo apt-get update $ sudo apt-get install oracle-java7-installer
加入 Elasticsearch 官方源后安装 elasticsearch:
$ wget -O - http://packages.elasticsearch.org/GPG-KEY-elasticsearch | apt-key add - $ sudo echo "deb http://packages.elasticsearch.org/elasticsearch/1.1/debian stable main" >> /etc/apt/sources.list $ sudo apt-get update $ sudo apt-get install elasticsearch
加入到系统启动文件并启动 elasticsearch 服务,用 curl 测试一下安装是否成功:
$ sudo update-rc.d elasticsearch defaults 95 1
$ sudo /etc/init.d/elasticsearch start
$ curl -X GET 'http://localhost:9200'
{
"status" : 200,
"name" : "Fer-de-Lance",
"version" : {
"number" : "1.1.1",
"build_hash" : "f1585f096d3f3985e73456debdc1a0745f512bbc",
"build_timestamp" : "2014-04-16T14:27:12Z",
"build_snapshot" : false,
"lucene_version" : "4.7"
},
"tagline" : "You Know, for Search"
}
Elasticsearch 的集群和数据管理界面 Marvel 非常赞,可惜只对开发环境免费,如果这个工具也免费就无敌了,安装很简单,完成后重启服务访问 http://192.168.2.172:9200/_plugin/marvel/ 就可以看到界面:
$ sudo /usr/share/elasticsearch/bin/plugin -i elasticsearch/marvel/latest $ sudo /etc/init.d/elasticsearch restart * Stopping Elasticsearch Server [ OK ] * Starting Elasticsearch Server [ OK ]

安装 Python 客户端驱动
和 MongoDB 一样,我们一般用程序和 Elasticsearch 交互,Elasticsearch 也支持多种语言的客户端驱动,这里仅安装 Python 驱动,其他语言可以参考官方文档。
$ sudo apt-get install python-pip $ sudo pip install elasticsearch
写个简单程序把 gene_info.txt 的数据导入到 Elasticsearch:
#!/usr/bin/python
# -*- coding: UTF-8 -*-
import os, os.path, sys, re
import csv, time, string
from datetime import datetime
from elasticsearch import Elasticsearch
def import_to_db():
data = csv.reader(open('gene_info.txt', 'rb'), delimiter=' ')
data.next()
es = Elasticsearch()
for row in data:
doc = {
'tax_id': row[0],
'GeneID': row[1],
'Symbol': row[2],
'LocusTag': row[3],
'Synonyms': row[4],
'dbXrefs': row[5],
'chromosome': row[6],
'map_location': row[7],
'description': row[8],
'type_of_gene': row[9],
'Symbol_from_nomenclature_authority': row[10],
'Full_name_from_nomenclature_authority': row[11],
'Nomenclature_status': row[12],
'Other_designations': row[13],
'Modification_date': row[14]
}
res = es.index(index="gene", doc_type='gene_info', body=doc)
def main():
import_to_db()
if __name__ == "__main__":
main()
Kibana 是一个功能强大的数据显示客户端,通过插件方式和 Elasticsearch 集成在一起,安装很容易,下载解压就可以了,然后重启 Elasticsearch 服务访问 http://192.168.2.172:9200/_plugin/kibana/ 就能看到界面:
$ wget https://download.elasticsearch.org/kibana/kibana/kibana-3.0.1.tar.gz $ tar zxvf kibana-3.0.1.tar.gz $ sudo mv kibana-3.0.1 /usr/share/elasticsearch/plugins/_site $ sudo /etc/init.d/elasticsearch restart
